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comEA protein (Xanthomonas campestris campestris) - STRING interaction network
"comEA" - DNA uptake protein and related DNA-binding proteins in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEADNA uptake protein and related DNA-binding proteins (110 aa)    
Predicted Functional Partners:
pilM
Tfp pilus assembly protein ATPase PilM (360 aa)
         
  0.780
comA
DNA uptake/competence protein; Predicted membrane metal-binding protein (796 aa)
   
   
  0.748
XCC1519
23S rRNA (guanosine-2’-O-)-methyltransferase RlmB; Specifically methylates the ribose of guanosine 2251 in 23S rRNA (249 aa)
         
  0.706
rlmB
tRNA/rRNA methyltransferase; rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family (300 aa)
         
  0.706
rpmD
Ribosomal protein L30/L7E (63 aa)
           
  0.700
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex (72 aa)
           
  0.700
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (287 aa)
           
  0.692
XCC2782
annotation not available (497 aa)
   
   
  0.671
XCC3277
Cytochrome c mono- and diheme variants (141 aa)
       
 
  0.669
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
       
 
  0.669
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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