STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apbEFAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family (324 aa)    
Predicted Functional Partners:
XCC2779
Sulfite reductase alpha subunit (flavoprotein)
 
     0.921
XCC2776
Predicted periplasmic protein
     0.919
XCC2777
annotation not available
 
     0.896
XCC2775
Uncharacterized protein conserved in bacteria
 
     0.863
hisI
Histidine biosynthesis bifunctional protein HisIE; Phosphoribosyl-AMP cyclohydrolase; In the C-terminal section; belongs to the PRA-PH family
     
 0.608
hisB
Histidine biosynthesis bifunctional protein HisB; Imidazoleglycerol-phosphate dehydratase; In the N-terminal section; belongs to the histidinol- phosphatase family
     
 0.565
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
     
 0.534
XCC2748
UPF0301 protein XCC2748; Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family
 
     0.445
XCC2773
PKHD-type hydroxylase XCC2773; Uncharacterized iron-regulated protein
   
   0.429
XCC2956
Chloride channel protein EriC
     
 0.418
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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