STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2775Uncharacterized protein conserved in bacteria (214 aa)    
Predicted Functional Partners:
XCC2776
Predicted periplasmic protein
   
 0.991
XCC2777
annotation not available
 
   
 0.932
XCC2773
PKHD-type hydroxylase XCC2773; Uncharacterized iron-regulated protein
 
     0.910
XCC2774
Uncharacterized protein; FOG: TPR repeat, SEL1 subfamily
       0.898
apbE
FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein; Belongs to the ApbE family
 
     0.863
fhuA2
Outer membrane receptor for monomeric catechols
 
   
 0.815
XCC2779
Sulfite reductase alpha subunit (flavoprotein)
 
     0.719
XCC3886
annotation not available
  
     0.443
bedB
Benzene 1,2-dioxygenase, ferredoxin protein; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
 
     0.434
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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