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sufR protein (Xanthomonas campestris campestris) - STRING interaction network
"sufR" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufRUncharacterized protein; Predicted transcriptional regulator (152 aa)    
Predicted Functional Partners:
sufB
ABC transporter permease; ABC-type transport system involved in Fe-S cluster assembly permease component (485 aa)
 
     
  0.907
sufD
ABC transporter permease; ABC-type transport system involved in Fe-S cluster assembly permease component (420 aa)
 
     
  0.756
sufC
ABC transporter ATP-binding protein; ABC-type transport system involved in Fe-S cluster assembly ATPase component (254 aa)
 
     
  0.734
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins (199 aa)
   
 
  0.707
XCC2769
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (413 aa)
         
  0.669
XCC3368
Glutaredoxin-like protein; Rhodanese-related sulfurtransferase (308 aa)
   
 
  0.570
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (321 aa)
           
  0.520
XCC2764
Proteins containing SET domain (139 aa)
              0.516
pfpI
Protease; Putative intracellular protease/amidase (180 aa)
              0.486
XCC0849
Uncharacterized protein; Predicted metal-sulfur cluster biosynthetic enzyme (220 aa)
 
          0.461
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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