STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate carbamoyltransferase catalytic chain; Belongs to the ATCase/OTCase family (315 aa)    
Predicted Functional Partners:
pyrC
Dihydroorotase and related cyclic amidohydrolases
 0.999
carA
Carbamoylphosphate synthase small subunit; Belongs to the CarA family
 0.999
carB
Carbamoylphosphate synthase large subunit (split gene in MJ)
 0.999
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family
 
 
 0.976
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily
 
  
 0.962
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily
  
 
 0.922
asnB2
Asparagine synthase (glutamine-hydrolyzing)
    
 0.910
asnB1
Asparagine synthase (glutamine-hydrolyzing)
    
 0.910
ygeA
Putative resistance protein; Unnamed protein product; Belongs to the aspartate/glutamate racemases family
     
  0.900
XCC0856
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
    
  0.900
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (15%) [HD]