STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2730Alcohol dehydrogenase; NADPH:quinone reductase and related Zn-dependent oxidoreductases (335 aa)    
Predicted Functional Partners:
fabD
(acyl-carrier-protein) S-malonyltransferase
 
  
   0.530
yagT
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs
     
 0.525
CAP50783.1
annotation not available
       0.522
yagS
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs
       0.522
XCC2727
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs
      0.522
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
   
  
 0.469
XCC2726
Uncharacterized protein; Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family
       0.468
XCC2731
Response regulator; FOG: GGDEF domain
       0.447
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (5%) [HD]