STRINGSTRING
CAP50783.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP50783.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP50783.1annotation not available (62 aa)    
Predicted Functional Partners:
XCC2727
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs (735 aa)
              0.845
yagS
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs (316 aa)
              0.845
yagT
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs (222 aa)
              0.845
XCC2726
Uncharacterized protein; Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family (324 aa)
              0.745
XCC2730
Alcohol dehydrogenase; NADPH-quinone reductase and related Zn-dependent oxidoreductases (335 aa)
              0.522
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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