STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2726Uncharacterized protein; Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family (324 aa)    
Predicted Functional Partners:
yagT
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs
 
  
 0.962
XCC2727
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs
 
  
 0.937
yagS
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs
 
  
 0.919
XCC1093
Ferredoxin; Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs
 
  
 0.808
CAP50783.1
annotation not available
       0.745
XCC2725
Uncharacterized MobA-related protein
 
  
 0.722
XCC1091
Hydroxylase large subunit; Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs
 
  
 0.714
XCC3709
Oxidoreductase; Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs
 
  
 0.684
XCC1092
Hydroxylase molybdopterin-containing subunit; Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs
 
  
 0.615
XCC2730
Alcohol dehydrogenase; NADPH:quinone reductase and related Zn-dependent oxidoreductases
       0.468
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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