STRINGSTRING
plaS protein (Xanthomonas campestris campestris) - STRING interaction network
"plaS" - Accessory protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plaSAccessory protein; FOG- Ankyrin repeat (254 aa)    
Predicted Functional Partners:
XCC2722
Outer membrane phospholipase A (398 aa)
 
     
  0.940
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis (382 aa)
   
 
      0.735
XCC2436
Uncharacterized protein (194 aa)
   
          0.709
XCC4063
annotation not available (196 aa)
   
      0.665
XCC0240
annotation not available (886 aa)
 
 
  0.644
XCC0248
annotation not available (133 aa)
   
          0.622
XCC3191
Uncharacterized protein (156 aa)
   
          0.620
XCC3075
annotation not available (388 aa)
   
          0.613
gcdH
Acyl-CoA dehydrogenases (387 aa)
           
  0.601
ppi
FKBP-type peptidyl-prolyl cis-trans isomerases 2 (157 aa)
           
  0.587
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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