STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2717Pirin; Unnamed protein product; Belongs to the pirin family (286 aa)    
Predicted Functional Partners:
azoR
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
  
  
 0.834
XCC2716
annotation not available
       0.755
oprN4
Outer membrane protein
     
 0.585
oprN5
Outer membrane protein
      
 0.581
czcC
Cation efflux system protein; Outer membrane protein
      
 0.581
cstA
Carbon starvation protein predicted membrane protein
  
    0.506
XCC2719
Uncharacterized protein
       0.490
oprN6
Outer membrane protein
     
 0.486
XCC2714
Unnamed protein product; Belongs to the pirin family
 
    
0.482
XCC3666
annotation not available
 
  
 0.416
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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