STRINGSTRING
CAP50817.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP50817.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP50817.1annotation not available (119 aa)    
Predicted Functional Partners:
creC
Two-component system sensor protein; Signal transduction histidine kinase (482 aa)
              0.845
creB
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (256 aa)
              0.845
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (328 aa)
              0.608
XCC2691
annotation not available (136 aa)
              0.566
creD
Inner membrane protein involved in colicin E2 resistance (439 aa)
              0.566
XCC2697
Uncharacterized protein; Histone acetyltransferase HPA2 and related acetyltransferases (217 aa)
              0.490
XCC2690
annotation not available (118 aa)
              0.415
XCC2689
annotation not available (198 aa)
              0.412
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (12%) [HD]