STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nthANitrilase; Predicted amidohydrolase (294 aa)    
Predicted Functional Partners:
XCC2689
annotation not available
 
  
 0.945
XCC0381
annotation not available
 
     0.806
XCC2690
annotation not available
       0.646
XCC2687
annotation not available
  
  
 0.538
creD
Inner membrane protein involved in colicin E2 resistance
       0.514
prpR
Propionate catabolism regulatory protein; Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
      
 0.512
comM
Competence related protein; Predicted ATPase with chaperone activity
      
 0.487
XCC2691
annotation not available
       0.467
fur2
Transcriptional regulator fur family; Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family
  
    0.453
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
     
 0.447
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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