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mexB protein (Xanthomonas campestris campestris) - STRING interaction network
"mexB" - Cation/multidrug efflux pump in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mexBCation/multidrug efflux pump (1044 aa)    
Predicted Functional Partners:
mexA
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (399 aa)
 
  0.995
oprN2
Outer membrane protein (497 aa)
 
  0.992
acrA2
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (436 aa)
 
  0.906
XCC1439
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (396 aa)
 
  0.871
oprN4
Outer membrane protein (474 aa)
 
  0.813
mtrC
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (412 aa)
 
  0.784
XCC2680
Transcriptional regulator (229 aa)
              0.762
XCC2341
Outer membrane protein (492 aa)
 
  0.759
oprN5
Outer membrane protein (504 aa)
 
  0.757
oprN1
Outer membrane protein (490 aa)
 
  0.676
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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