STRINGSTRING
XCC2677 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2677" - Uncharacterized conserved protein contains double-stranded beta-helix domain in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2677Uncharacterized conserved protein contains double-stranded beta-helix domain (157 aa)    
Predicted Functional Partners:
XCC2678
Transcriptional regulator (304 aa)
 
          0.765
chlE
Carboxylic ester hydrolase; Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family (540 aa)
            0.620
XCC2679
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) (327 aa)
          0.489
XCC0285
Transcriptional regulator (329 aa)
 
          0.485
XCC2741
Bifunctional diaminopimelate decarboxylase/aspartate kinase; Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family (896 aa)
         
  0.482
opdE
Transcriptional regulator; Arabinose efflux permease (398 aa)
 
          0.453
rpoH
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) (291 aa)
       
      0.449
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (624 aa)
       
      0.449
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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