STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2658Outer membrane receptor proteins mostly Fe transport (688 aa)    
Predicted Functional Partners:
XCC2657
annotation not available
 
     0.660
CAP50852.1
annotation not available
       0.645
XCC0257
Nitrile hydratase activator; Putative GTPases (G3E family)
  
    0.621
XCC3967
Periplasmic protein TonB, links inner and outer membranes
 
 
 0.496
moaB
Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin
    
   0.472
CAP52850.1
Uncharacterized conserved protein
    
   0.472
XCC3714
Ferrichrome-iron receptor 3; Outer membrane receptor proteins mostly Fe transport
  
 
 0.458
czcC
Cation efflux system protein; Outer membrane protein
  
  
 0.445
XCC1340
Outer membrane receptor proteins, mostly Fe transport
 
  
 0.440
fhuA2
Outer membrane receptor for monomeric catechols
  
 
 0.437
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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