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XCC2640 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2640" - Pseudouridine synthase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2640Pseudouridine synthase; 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family (260 aa)    
Predicted Functional Partners:
XCC2641
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain (788 aa)
              0.845
deaD
ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation (642 aa)
     
      0.563
XCC2752
Uncharacterized protein (299 aa)
            0.523
XCC2644
Uncharacterized protein; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) (224 aa)
 
          0.429
XCC1830
Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) (188 aa)
 
      0.409
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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