STRINGSTRING
XCC2627 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2627" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2627Transcriptional regulator (330 aa)    
Predicted Functional Partners:
XCC2626
Uncharacterized protein; Permeases of the drug/metabolite transporter (DMT) superfamily (295 aa)
 
          0.658
XCC0040
Transcriptional regulator (300 aa)
   
        0.641
XCC3448
Transcriptional regulator (301 aa)
   
          0.584
XCC1190
Transcriptional regulator (335 aa)
   
          0.568
rbcR
Transcriptional regulator (318 aa)
 
     
  0.548
gcvR
Glycine cleavage system transcriptional repressor; Unnamed protein product (208 aa)
       
 
  0.542
XCC2629
annotation not available (478 aa)
 
          0.529
XCC1595
Transcriptional regulator (339 aa)
   
        0.520
XCC2170
Iron dependent repressor; Mn-dependent transcriptional regulator (155 aa)
       
 
  0.496
XCC3725
Transcriptional regulator (308 aa)
   
          0.489
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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