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XCC2606 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2606" - TldD protein in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2606TldD protein; Predicted Zn-dependent proteases and their inactivated homologs (481 aa)    
Predicted Functional Partners:
pmbA
PmbA protein; Predicted Zn-dependent proteases and their inactivated homologs (470 aa)
 
 
0.871
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family (207 aa)
 
            0.701
XCC2607
annotation not available (251 aa)
              0.647
rng
Ribonucleases G and E (499 aa)
            0.473
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (624 aa)
       
 
  0.447
rpoH
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) (291 aa)
       
 
  0.410
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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