STRINGSTRING
XCC2602 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2602" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2602annotation not available (393 aa)    
Predicted Functional Partners:
XCC0541
annotation not available (252 aa)
   
          0.737
XCC1430
annotation not available (874 aa)
   
          0.710
XCC0572
annotation not available (384 aa)
   
          0.702
XCC0372
Hydrolase; Lysophospholipase (308 aa)
   
          0.702
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
   
          0.673
XCC2382
annotation not available (235 aa)
   
          0.633
CAP50911.1
annotation not available (72 aa)
              0.625
XCC0050
Outer membrane receptor proteins, mostly Fe transport (897 aa)
   
          0.589
XCC3444
annotation not available (381 aa)
   
     
  0.588
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
          0.578
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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