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nlpC protein (Xanthomonas campestris campestris) - STRING interaction network
"nlpC" - Lipoprotein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlpCLipoprotein; Cell wall-associated hydrolases (invasion-associated proteins) (191 aa)    
Predicted Functional Partners:
ampD
N-acetylmuramoyl-L-alanine amidase; Negative regulator of beta-lactamase expression (266 aa)
         
  0.738
XCC3806
annotation not available (469 aa)
           
  0.720
XCC2584
Uncharacterized protein; Cell wall-associated hydrolases (invasion-associated proteins) (249 aa)
 
       
0.650
yjbJ
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (322 aa)
 
 
  0.620
XCC2582
FKBP-type peptidyl-prolyl cis-trans isomerases 2 (159 aa)
              0.617
tyrA
Chorismate mutase/prephenate dehydrogenase; Prephenate dehydrogenase (375 aa)
         
  0.507
XCC2579
Reductase; Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (456 aa)
         
  0.458
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (448 aa)
         
  0.443
yxaH
Predicted membrane protein (414 aa)
              0.438
XCC2578
Methylated-DNA-protein-cysteine S-methyltransferase related protein; Methylated DNA-protein cysteine methyltransferase (197 aa)
              0.436
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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