STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP50942.1annotation not available (61 aa)    
Predicted Functional Partners:
XCC0588
annotation not available
  
     0.699
XCC0510
Predicted transcriptional regulators
  
     0.603
XCC4179
annotation not available
  
     0.596
XCC3972
annotation not available
  
     0.587
XCC4011
annotation not available
  
     0.511
XCC0013
Uncharacterized protein
  
     0.502
XCC0274
annotation not available
  
     0.502
XCC3745
Uncharacterized protein; Lipid A core - O-antigen ligase and related enzymes
  
     0.502
XCC2192
annotation not available
  
     0.487
XCC0571
Uncharacterized protein
  
     0.487
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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