STRINGSTRING
XCC2560 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2560" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2560annotation not available (278 aa)    
Predicted Functional Partners:
XCC2561
annotation not available (146 aa)
            0.961
XCC3075
annotation not available (388 aa)
   
          0.773
XCC2722
Outer membrane phospholipase A (398 aa)
   
          0.728
XCC0240
annotation not available (886 aa)
 
   
  0.707
XCC2562
Uncharacterized membrane protein (homolog of Drosophila rhomboid) (487 aa)
 
          0.702
XCC1496
annotation not available (177 aa)
   
          0.686
malT
ATP-dependent transcriptional regulator (921 aa)
   
          0.670
XCC0047
annotation not available (283 aa)
   
          0.655
XCC3443
Methyltransferase; DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family (354 aa)
   
          0.651
XCC3884
annotation not available (309 aa)
   
          0.610
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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