STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2537annotation not available (281 aa)    
Predicted Functional Partners:
XCC2535
annotation not available
 
     0.976
glbN
Truncated hemoglobins
 
     0.975
XCC2536
Phosphodiesterase; Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain
     0.923
XCC2538
Oxidoreductase; Isopenicillin N synthase and related dioxygenases; Belongs to the iron/ascorbate-dependent oxidoreductase family
     
 0.682
XCC0784
Glycine rich protein; Beta-propeller domains of methanol dehydrogenase type
   
    0.635
copA
Putative multicopper oxidases
   
 
 0.609
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
   
 
 0.584
XCC3277
Cytochrome c mono- and diheme variants
   
 
 0.584
XCC2116
annotation not available
  
 
 0.577
XCC3476
Surface antigen protein
   
 
 0.542
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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