STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2506Uncharacterized protein conserved in bacteria (375 aa)    
Predicted Functional Partners:
XCC2504
Uncharacterized protein
 
     0.865
nadC
Nicotinate-nucleotide pyrophosphorylase; Unnamed protein product; Belongs to the NadC/ModD family
       0.845
XCC3189
Uncharacterized protein
  
     0.669
XCC1298
Subtilisin-like serine proteases
  
     0.654
XCC0546
annotation not available
  
     0.652
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit
  
     0.645
phy
Uncharacterized protein; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
  
     0.636
purE
N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
       0.613
purK
N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
       0.613
XCC3794
annotation not available
  
     0.606
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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