STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilWConserved hypothetical protein; Tfp pilus assembly protein PilW (323 aa)    
Predicted Functional Partners:
pilV
Pre-pilin leader sequence; Tfp pilus assembly protein PilV
 
  
 0.995
pilX
Conserved hypothetical protein; Tfp pilus assembly protein PilX
 
  
 0.995
pilY
Tfp pilus assembly protein, tip-associated adhesin PilY1
 
  
 0.992
fimT
Putative Tfp pilus assembly protein
 
  
 0.985
CAP51022.1
Unnamed protein product
 
  
 0.967
XCC2486
Fimbrial biogenesis protein; Tfp pilus assembly protein FimT
 
  
 0.876
pilN
Tfp pilus assembly protein PilN
 
   
 0.783
pilO
Tfp pilus assembly protein PilO
 
   
 0.778
pilM
Tfp pilus assembly protein ATPase PilM
 
   
 0.719
CAP51016.1
Predicted signal transduction protein with a C-terminal ATPase domain
 
     0.648
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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