STRINGSTRING
virB4 protein (Xanthomonas campestris campestris) - STRING interaction network
"virB4" - VirB4 protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB4VirB4 protein; Type IV secretory pathway, VirB4 components (817 aa)    
Predicted Functional Partners:
virB10
Type IV secretion system putative channel component VirB4; Type IV secretory pathway, VirB10 components (389 aa)
 
 
 
  0.966
virB11
VirB11 protein; Type IV secretory pathway, VirB11 components,and related ATPases involved in archaeal flagella biosynthesis (352 aa)
     
  0.966
ptlF
VirB9 protein; Type IV secretory pathway, VirB9 components (255 aa)
     
  0.962
virB1
Type IV secretion system lytic murein transglycosylase component VirB1; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (279 aa)
     
  0.947
virD4
VirD4 protein; Type IV secretory pathway, VirD4 components (557 aa)
     
  0.932
ptlB
VirB3 protein; Type IV secretory pathway, VirB3 components (103 aa)
 
     
  0.913
CAP51033.1
annotation not available (136 aa)
 
     
  0.906
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
 
     
  0.902
ptlE
Type IV secretion system, component VirB8 (335 aa)
     
  0.899
CAP51036.1
annotation not available (276 aa)
              0.849
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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