STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51038.1annotation not available (162 aa)    
Predicted Functional Partners:
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components
       0.845
CAP51036.1
annotation not available
     
 0.582
virB4
VirB4 protein; Type IV secretory pathway, VirB4 components
       0.571
CAP51039.1
Uncharacterized protein conserved in bacteria
       0.521
CAP51040.1
Putative peptidoglycan-binding domain-containing protein
       0.434
CAP51033.1
annotation not available
       0.404
ptlB
VirB3 protein; Type IV secretory pathway, VirB3 components
       0.404
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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