STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51039.1Uncharacterized protein conserved in bacteria (196 aa)    
Predicted Functional Partners:
CAP51040.1
Putative peptidoglycan-binding domain-containing protein
 
     0.880
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase
  
     0.706
XCC3461
Uncharacterized protein; ATPases of the AAA+ class
  
     0.686
wxcD
wxcD; Glycosyltransferase
  
     0.671
XCC0507
Ice nucleation protein; Uncharacterized protein conserved in bacteria
  
     0.601
XCC1459
Integrase
  
     0.553
XCC3802
Uncharacterized protein; Putative peptidoglycan-binding domain-containing protein
 
     0.548
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins
 
 
   0.539
hpaP
annotation not available
  
     0.537
CAP53612.1
Rhs family protein
  
     0.527
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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