STRINGSTRING
CAP51040.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP51040.1" - Putative peptidoglycan-binding domain-containing protein in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP51040.1Putative peptidoglycan-binding domain-containing protein (441 aa)    
Predicted Functional Partners:
CAP51039.1
Uncharacterized protein conserved in bacteria (196 aa)
 
          0.880
XCC3461
Uncharacterized protein; ATPases of the AAA+ class (982 aa)
   
          0.732
CAP51041.1
Type IV secretory pathway, VirB4 components (507 aa)
 
          0.664
hpaP
annotation not available (203 aa)
   
          0.658
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues (417 aa)
   
          0.653
CAP51033.1
annotation not available (136 aa)
 
          0.650
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
 
        0.623
ptlE
Type IV secretion system, component VirB8 (335 aa)
 
          0.622
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
 
          0.618
virB6_2
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
 
          0.614
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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