STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aglA1Alpha-glucosidase; Glycosidases (538 aa)    
Predicted Functional Partners:
treS
Trehalose synthase; Glycosidases
 
0.958
scrK
Fructokinase; Sugar kinases, ribokinase family
 
 
 0.927
malQ
4-alpha-glucanotransferase
 
 
 0.925
suh
Amylosucrase or alpha amylase; Glycosidases
  
  
0.920
amyA
Alpha-amylase; Glycosidases
     
 0.901
XCC2468
Alpha-glucosidase
 
 
 0.863
susB
annotation not available
  
 
 0.823
XCC2892
Glucan 1,4-beta-glucosidase; Beta-glucosidase-related glycosidases
    
 0.658
bgl3
Glucan 1,4-beta-glucosidase; Beta-glucosidase-related glycosidases
    
 0.658
bgl5
Beta-glucosidase-related glycosidases
    
 0.658
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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