STRINGSTRING
cgt protein (Xanthomonas campestris campestris) - STRING interaction network
"cgt" - Cyclomaltodextrin glucanotransferase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgtCyclomaltodextrin glucanotransferase (CGTase); Glycosidases (557 aa)    
Predicted Functional Partners:
XCC2467
Uncharacterized protein; Glycogen debranching enzyme (773 aa)
 
 
  0.954
suc
Transport protein; Permeases of the major facilitator superfamily (492 aa)
 
     
  0.914
cga
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (592 aa)
   
   
  0.749
XCC2468
Alpha-glucosidase (692 aa)
 
   
  0.742
tgt
Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1’ of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1’ of the ribose to form th [...] (381 aa)
           
  0.720
XCC4077
Cellobionic acid phosphorylase; Catalyzes the reversible phosphorolysis of cellobionic acid (4-O-beta-D-glucopyranosyl-D-gluconate), a probable step in cellulose degradation. May be part of a metabolic pathway where cellobionic acid is converted into alpha-D-glucose 1-phosphate and D-gluconic acid to enter glycolysis and the pentose phosphate pathway, respectively. Produces 4-O-beta-D-glucopyranosyl-D- glucuronate from alpha-D-glucose 1-phosphate and D-glucuronate with low activity in the synthetic direction (798 aa)
           
  0.712
XCC2469
Outer membrane receptor proteins mostly Fe transport (920 aa)
 
          0.707
XCC2464
Maltose transport gene repressor; Transcriptional regulators (377 aa)
 
   
  0.705
treS
Trehalose synthase; Glycosidases (1116 aa)
 
 
0.553
XCC2614
Uncharacterized protein; Predicted phosphatase (511 aa)
   
          0.461
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (16%) [HD]