STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gumBPeriplasmic protein involved in polysaccharide export (286 aa)    
Predicted Functional Partners:
gumC
Uncharacterized protein involved in exopolysaccharide biosynthesis
 
 
 0.996
gumD
GumD protein; Sugar transferases involved in lipopolysaccharide synthesis
 
  
 0.959
gumJ
Membrane protein involved in the export of O-antigen and teichoic acid
 
 
 0.932
gumM
GumM protein; Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family
 
   
 0.905
gumE
GumE protein; Polymerization of the exopolysaccharide xanthan
 
   
 0.898
gumF
GumF protein; Fucose 4-O-acetylase and related acetyltransferases
 
  
 0.887
gumK
UDP-glucuronate:glycolipid 2-beta-glucuronosyltransferase; Catalyzes the transfer of a glucuronic acid (GlcA) residue from UDP-glucuronate to mannose-alpha-1,3-glucose-beta- 1,4-glucose-P-P-polyisoprenyl to form the lipid-linked tetrasaccharide GlcA-Man-Glc(2)-PP-Pol, with a glucuronic acid- beta-mannose linkage. Is involved in the biosynthesis of the exopolysaccharide xanthan, since it catalyzes the fourth glycosylation step in the assembly of the pentasaccharide-P-P- polyisoprenyl repeating unit of xanthan; Belongs to the glycosyltransferase 70 family
 
  
 0.878
gumG
GumG protein; Fucose 4-O-acetylase and related acetyltransferases
 
  
 0.862
gumH
GumH protein; Glycosyltransferase
 
  
 0.838
gumL
GumL protein; Pyruvylation of the outer mannose of xanthan
 
   
 0.821
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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