STRINGSTRING
gumN protein (Xanthomonas campestris campestris) - STRING interaction network
"gumN" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gumNUncharacterized protein conserved in bacteria (341 aa)    
Predicted Functional Partners:
gumP
GumP protein; Zn-dependent hydrolases, including glyoxylases (282 aa)
         
  0.863
gumO
GumO; 3-oxoacyl-[acyl-carrier-protein] synthase III (435 aa)
         
  0.850
XCC2436
Uncharacterized protein (194 aa)
 
          0.775
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis (382 aa)
 
          0.741
gumM
GumM protein; Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family (263 aa)
         
  0.712
alg2
Glycosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase (414 aa)
 
          0.699
XCC2442
Uncharacterized protein (165 aa)
              0.665
XCC2438
NAD(P)H steroid dehydrogenase; Nucleoside-diphosphate-sugar epimerases (319 aa)
              0.652
XCC0025
Uncharacterized protein; Putative peptidase (143 aa)
   
          0.638
gumL
GumL protein; Pyruvylation of the outer mannose of xanthan (264 aa)
         
  0.583
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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