STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gumPGumP protein; Zn-dependent hydrolases, including glyoxylases (282 aa)    
Predicted Functional Partners:
gumO
GumO; 3-oxoacyl-[acyl-carrier-protein] synthase III
 
  
 0.973
XCC2438
NAD(P)H steroid dehydrogenase; Nucleoside-diphosphate-sugar epimerases
    0.956
XCC2436
Uncharacterized protein
 
     0.955
alg2
Glycosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase
 
     0.947
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis
 
     0.935
gumN
Uncharacterized protein conserved in bacteria
     
 0.863
gumM
GumM protein; Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family
     
 0.740
XCC0219
NAD(P)H steroid dehydrogenase; Nucleoside-diphosphate-sugar epimerases
 
    0.579
XCC2722
Outer membrane phospholipase A
  
     0.573
XCC2442
Uncharacterized protein
       0.529
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (9%) [HD]