STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2438NAD(P)H steroid dehydrogenase; Nucleoside-diphosphate-sugar epimerases (319 aa)    
Predicted Functional Partners:
XCC2436
Uncharacterized protein
 
     0.958
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis
 
 
 0.957
gumP
GumP protein; Zn-dependent hydrolases, including glyoxylases
    0.956
alg2
Glycosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase
 
   
 0.921
gumO
GumO; 3-oxoacyl-[acyl-carrier-protein] synthase III
 
    0.891
gumN
Uncharacterized protein conserved in bacteria
       0.652
gumK
UDP-glucuronate:glycolipid 2-beta-glucuronosyltransferase; Catalyzes the transfer of a glucuronic acid (GlcA) residue from UDP-glucuronate to mannose-alpha-1,3-glucose-beta- 1,4-glucose-P-P-polyisoprenyl to form the lipid-linked tetrasaccharide GlcA-Man-Glc(2)-PP-Pol, with a glucuronic acid- beta-mannose linkage. Is involved in the biosynthesis of the exopolysaccharide xanthan, since it catalyzes the fourth glycosylation step in the assembly of the pentasaccharide-P-P- polyisoprenyl repeating unit of xanthan; Belongs to the glycosyltransferase 70 family
  
 
 0.545
XCC2442
Uncharacterized protein
       0.517
mphE
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family
 
   0.500
vipA
Polysaccharide biosynthetic protein; UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family
  
 
 0.494
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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