STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2436Uncharacterized protein (194 aa)    
Predicted Functional Partners:
ugcG
Uncharacterized protein; Glycosyltransferases, probably involved in cell wall biogenesis
 
     0.977
alg2
Glycosyltransferase; Glycosyl transferases, related to UDP-glucuronosyltransferase
 
     0.968
XCC2438
NAD(P)H steroid dehydrogenase; Nucleoside-diphosphate-sugar epimerases
 
     0.958
gumP
GumP protein; Zn-dependent hydrolases, including glyoxylases
 
     0.955
gumO
GumO; 3-oxoacyl-[acyl-carrier-protein] synthase III
 
     0.909
gumN
Uncharacterized protein conserved in bacteria
 
     0.775
XCC4063
annotation not available
  
     0.748
XCC0248
annotation not available
  
     0.745
plaS
Accessory protein; FOG: Ankyrin repeat
  
     0.709
XCC3191
Uncharacterized protein
  
     0.679
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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