STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE2Acyl-CoA dehydrogenases (597 aa)    
Predicted Functional Partners:
etfB
Electron transfer flavoprotein beta subunit; Unnamed protein product
 
 
 0.860
etfA
Electron transfer flavoprotein, alpha subunit
 
 0.831
XCC2431
annotation not available
       0.818
fadD
Acid-CoA ligase; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  
  
 0.660
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase
 
 
 0.624
XCC1833
Enoyl-CoA hydratase/carnithine racemase
 
 
 0.594
fadB2
3-hydroxyacyl-CoA dehydrogenase
  
 
 0.563
etf-QO
Flavoprotein-ubiquinone oxidoreductase; Dehydrogenases (flavoproteins)
 
  
 0.554
XCC2430
Outer membrane lipoprotein; Bacterial lipocalin
  
    0.543
ech1
3-hydroxybutyryl-CoA dehydratase; Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family
 
 
 0.522
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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