STRINGSTRING
fadE2 protein (Xanthomonas campestris campestris) - STRING interaction network
"fadE2" - Acyl-CoA dehydrogenases in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE2Acyl-CoA dehydrogenases (597 aa)    
Predicted Functional Partners:
etfB
Electron transfer flavoprotein beta subunit; Unnamed protein product (248 aa)
 
 
  0.860
etfA
Electron transfer flavoprotein, alpha subunit (314 aa)
 
  0.831
XCC2431
annotation not available (159 aa)
              0.818
fadD
Acid-CoA ligase; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (490 aa)
   
   
  0.660
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase (690 aa)
 
 
  0.624
XCC1833
Enoyl-CoA hydratase/carnithine racemase (265 aa)
 
 
  0.594
fadB2
3-hydroxyacyl-CoA dehydrogenase (790 aa)
   
 
  0.563
etf-QO
Flavoprotein-ubiquinone oxidoreductase; Dehydrogenases (flavoproteins) (549 aa)
 
   
  0.554
XCC2430
Outer membrane lipoprotein; Bacterial lipocalin (178 aa)
   
        0.543
ech1
3-hydroxybutyryl-CoA dehydratase; Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family (260 aa)
 
 
  0.522
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]