STRINGSTRING
XCC2424 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2424" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2424annotation not available (201 aa)    
Predicted Functional Partners:
XCC3077
annotation not available (290 aa)
   
          0.776
XCC0572
annotation not available (384 aa)
   
          0.633
XCC4137
annotation not available (344 aa)
   
          0.618
XCC4062
annotation not available (318 aa)
   
          0.594
CAP51862.1
Signal transduction kinase (515 aa)
   
          0.589
XCC0372
Hydrolase; Lysophospholipase (308 aa)
   
          0.587
XCC4186
Leucine-rich repeat (LRR) protein (610 aa)
   
          0.582
XCC3753
Tfp pilus assembly protein major pilin PilA (246 aa)
   
          0.545
XCC0070
annotation not available (91 aa)
   
          0.532
XCC3823
Disulphide-isomerase; Thiol-disulfide isomerase and thioredoxins (525 aa)
   
          0.529
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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