STRINGSTRING
XCC2405 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2405" - Peptidase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2405Peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (778 aa)    
Predicted Functional Partners:
XCC2404
Uncharacterized protein; Beta-galactosidase (545 aa)
              0.848
yveA
Amino acid transporter (528 aa)
              0.846
XCC2407
annotation not available (618 aa)
 
          0.743
XCC2408
Uncharacterized protein conserved in bacteria (608 aa)
          0.705
dapA2
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family (302 aa)
 
        0.577
aldH
Ketoglutarate semialdehyde dehydrogenase; NAD-dependent aldehyde dehydrogenases (531 aa)
 
          0.521
XCC2403
annotation not available (98 aa)
              0.513
fucA2
Uncharacterized protein; Alpha-L-fucosidase (642 aa)
   
          0.483
nanH
Uncharacterized protein; Predicted neuraminidase (sialidase) (355 aa)
   
          0.459
XCC2415
4-hydroxyproline 2-epimerase; Catalyzes the epimerization of trans-4-hydroxy-L-proline (t4LHyp) to cis-4-hydroxy-D-proline (c4DHyp). Is likely involved in a degradation pathway that converts t4LHyp to alpha- ketoglutarate. Can also catalyze the epimerization of trans-3- hydroxy-L-proline (t3LHyp) to cis-3-hydroxy-D-proline (c3DHyp), albeit with 500-fold lower efficiency. Displays no proline racemase activity (312 aa)
 
          0.455
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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