STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2404Uncharacterized protein; Beta-galactosidase (545 aa)    
Predicted Functional Partners:
yveA
Amino acid transporter
       0.898
XCC2405
Peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
       0.848
xynB
annotation not available
 
   
 0.726
aglA2
Alpha-xylosidase; Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family
  
     0.658
XCC2408
Uncharacterized protein conserved in bacteria
       0.640
XCC2407
annotation not available
       0.640
XCC3162
Glycosyl hydrolase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family
 
   
 0.586
XCC2403
annotation not available
       0.556
XCC2394
Uncharacterized protein conserved in bacteria
 
    0.514
XCC4180
Uncharacterized protein; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
 
   
 0.507
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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