STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2401annotation not available (784 aa)    
Predicted Functional Partners:
XCC3393
Uncharacterized protein; Glycosyltransferase
 
   0.763
nnrE
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family
  
   0.761
XCC1656
Uncharacterized protein; Cytochrome c biogenesis factor
  
     0.657
XCC3052
Uncharacterized protein; Siderophore synthetase component
  
    0.632
XCC1554
Predicted membrane protein
  
     0.602
XCC2830
annotation not available
  
    0.595
XCC3395
Two-component system sensor protein; Signal transduction histidine kinase
  
    0.583
XCC1668
annotation not available
  
     0.574
fecA1
Citrate-dependent iron transporter; Outer membrane receptor for Fe3+-dicitrate
  
     0.569
XCC2395
Outer membrane receptor proteins mostly Fe transport
  
     0.558
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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