STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2400Outer membrane receptor proteins mostly Fe transport (945 aa)    
Predicted Functional Partners:
XCC2399
annotation not available
 
     0.745
XCC0759
Outer membrane receptor proteins mostly Fe transport
  
  
 0.630
XCC1041
Outer membrane receptor proteins, mostly Fe transport
  
  
 0.626
XCC1037
Outer membrane receptor proteins mostly Fe transport
  
  
 0.626
XCC3209
Outer membrane receptor proteins mostly Fe transport
  
  
 0.616
CAP50899.1
Outer membrane receptor for ferrienterochelin and colicins
  
    0.600
XCC1247
annotation not available
  
     0.587
XCC2398
Xylosidase/arabinosidase; Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family
 
     0.575
XCC2397
Peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
 
     0.560
fecA1
Citrate-dependent iron transporter; Outer membrane receptor for Fe3+-dicitrate
  
  
 0.559
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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