STRINGSTRING
XCC2397 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC2397" - Peptidase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2397Peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (806 aa)    
Predicted Functional Partners:
XCC2398
Xylosidase/arabinosidase; Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family (532 aa)
 
          0.881
XCC2399
annotation not available (1453 aa)
 
        0.878
XCC2400
Outer membrane receptor proteins mostly Fe transport (945 aa)
 
          0.560
nanH
Uncharacterized protein; Predicted neuraminidase (sialidase) (355 aa)
   
          0.534
avrXccA2
annotation not available (588 aa)
              0.471
fucA2
Uncharacterized protein; Alpha-L-fucosidase (642 aa)
   
          0.455
dapA2
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family (302 aa)
   
        0.438
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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