STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2395Outer membrane receptor proteins mostly Fe transport (966 aa)    
Predicted Functional Partners:
fpvA3
Outer membrane receptor proteins mostly Fe transport
  
  
 0.655
XCC2573
Oar protein; Outer membrane receptor for ferrienterochelin and colicins
  
    0.645
XCC2887
Outer membrane receptor proteins mostly Fe transport
  
  
 0.582
XCC0946
Outer membrane receptor proteins mostly Fe transport
  
  
 0.573
XCC2401
annotation not available
  
     0.558
XCC2407
annotation not available
  
     0.552
XCC1037
Outer membrane receptor proteins mostly Fe transport
  
  
 0.530
XCC4040
Uncharacterized protein conserved in bacteria
  
     0.528
XCC2944
Outer membrane receptor proteins
  
  
 0.524
XCC2394
Uncharacterized protein conserved in bacteria
       0.508
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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