STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ggt2Gamma-glutamyltranspeptidase; Gamma-glutamyltransferase (593 aa)    
Predicted Functional Partners:
pepA2
Leucyl aminopeptidase; Belongs to the peptidase M17 family
  
 
 0.919
XCC2579
Reductase; Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzymes; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
    
 0.916
XCC2389
Ferredoxin
 
     0.912
gpo
Glutathione peroxidase; Belongs to the glutathione peroxidase family
   
 
 0.910
XCC4213
Glutathione peroxidase; Belongs to the glutathione peroxidase family
   
 
 0.910
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family
   
 0.909
XCC1501
Glutathione peroxidase; Unnamed protein product; Belongs to the glutathione peroxidase family
   
 
 0.908
pepA1
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
   
 
 0.908
gshB
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
     
 0.906
gshA
Glutamate--cysteine ligase; Gamma-glutamylcysteine synthetase
     
  0.900
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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