STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2383Uncharacterized protein; Predicted phosphohydrolases (461 aa)    
Predicted Functional Partners:
phy
Uncharacterized protein; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
 
   
 0.919
XCC2385
Outer membrane receptor proteins mostly Fe transport
 
     0.877
XCC1185
annotation not available
 
  
 0.719
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
       0.678
phoA
Alkaline phosphatase; Unnamed protein product; Belongs to the alkaline phosphatase family
  
  
 0.671
XCC0521
Ribonuclease; Endonuclease I
 
  
 0.660
XCC4112
annotation not available
 
     0.545
XCC2382
annotation not available
  
    0.524
XCC0240
annotation not available
  
 
 0.507
XCC0089
annotation not available
  
     0.506
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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