STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC2365Unnamed protein product (1669 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
   
 
 0.959
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family
    
 0.949
gltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
     
 0.915
glnA1
Glutamine synthetase
     
 0.913
glnA2
Glutamine synthetase
     
 0.910
glnA3
Glutamine synthetase
     
 0.910
nasD
NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
    
 0.905
XCC3364
Aminotransferase; Aspartate/tyrosine/aromatic aminotransferase
     
 0.900
argB
Acetylglutamate kinase; Unnamed protein product
     
 0.900
XCC2217
Hydrolase; Predicted amidohydrolase
     
  0.900
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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