STRINGSTRING
rrpX protein (Xanthomonas campestris campestris) - STRING interaction network
"rrpX" - Response regulator containing a CheY-like receiver domain and a GGDEF domain in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrpXResponse regulator containing a CheY-like receiver domain and a GGDEF domain (432 aa)    
Predicted Functional Partners:
XCC2361
Two-component system regulatory protein; Response regulator containing a CheY-like receiver domain and an HD-GYP domain (327 aa)
 
 
  0.782
cls2
Cardiolipin synthase; Phosphatidylserine/phosphatidylglycerophosphate (659 aa)
     
   
  0.706
pssA2
Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (257 aa)
           
  0.702
pssA1
CDP-diacylglycerol-serine o-phosphatidyltransferase; Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (198 aa)
           
  0.702
proP2
Prop transport protein; Permeases of the major facilitator superfamily (427 aa)
           
  0.701
XCC2351
Uncharacterized protein; Hemerythrin (153 aa)
 
          0.664
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (106 aa)
     
        0.646
rplV
50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) (113 aa)
     
        0.643
rplD
50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (201 aa)
     
        0.632
XCC2153
Two-component system sensor protein; FOG- PAS/PAC domain (1146 aa)
 
 
  0.629
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]