STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnA3Glutamine synthetase (461 aa)    
Predicted Functional Partners:
XCC2347
Predicted glutamine amidotransferases
 
  
 0.988
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
  
 
 0.986
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family
     
 0.947
glnA2
Glutamine synthetase
 
  
0.927
XCC2349
Uncharacterized protein; Glycine/D-amino acid oxidases (deaminating)
 
  
 0.926
gltD
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
  
 
 0.924
carA
Carbamoylphosphate synthase small subunit; Belongs to the CarA family
  
 0.924
glmS2
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
  
 
 0.924
carB
Carbamoylphosphate synthase large subunit (split gene in MJ)
  
 
 0.922
nasD
NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
    
 0.917
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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