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rmrA protein (Xanthomonas campestris campestris) - STRING interaction network
"rmrA" - Membrane-fusion protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmrAMembrane-fusion protein (413 aa)    
Predicted Functional Partners:
XCC2342
Transport protein; Permeases of the major facilitator superfamily (528 aa)
 
   
  0.980
XCC2341
Outer membrane protein (492 aa)
 
 
  0.931
pmrB
Multidrug resistance membrane translocase; Permeases of the major facilitator superfamily (526 aa)
 
 
  0.808
oprN5
Outer membrane protein (504 aa)
 
 
  0.735
oprN4
Outer membrane protein (474 aa)
 
 
  0.602
raxC
Outer membrane protein (457 aa)
   
 
  0.576
potI
ABC-type spermidine/putrescine transport system permease component II (282 aa)
              0.568
potH
Polyamine transport protein; ABC-type spermidine/putrescine transport system permease component I (352 aa)
              0.568
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (383 aa)
              0.566
oprN2
Outer membrane protein (497 aa)
 
 
  0.522
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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